De elektronische studiegids voor het academiejaar 2025 - 2026 is onder voorbehoud.





Biological Research Techniques (3127)

  
Coordinating lecturer :Prof. dr. Francois RINEAU 
  
With assistance :Mevrouw Ann WIJGAERTS 
  
Member of the teaching team :Prof. dr. Ann CUYPERS 
 De heer Bart RUTTENS 
 Prof. dr. Dries VANDAMME 
 dr. Elien DERVEAUX 
 dr. Frank VAN BELLEGHEM 
 Prof. dr. Jan D'HAEN 
 Prof. dr. Natalie BEENAERTS 
 Mevrouw Natascha STEFFANIE 
 Prof. dr. Nikol KMENTOVA 
 Prof. dr. Peter ADRIAENSENS 
 dr. Sofie THIJS 
 Prof. dr. Wouter MARCHAL 
 dr. Wouter SILLEN 


Language of instruction : English


Credits: 5,0
  
Period: semester 1 (5sp)
  
2nd Chance Exam1: Yes
  
Final grade2: Numerical
 
Exam contract: not possible


 
Sequentiality
 
   Mandatory sequentiality bound on the level of programme components
 
 
  Following programme components must have been included in your study programme in a previous education period
    Laboratory skills (2918) 3.0 stptn
 
   Advising sequentiality bound on the level of programme components
 
 
  Following programme components are advised to also be included in your study programme up till now.
    Chemistry for Life Sciences 1 (2919) .0 stptn
    Chemistry for Life Sciences 2 (2920) 3.0 stptn
    Molecular genetics (3726) .0 stptn
 

Prerequisites
  • The student(s) can differentiate chemicals based on bond types and molecular structure
  • The student(s) can explain and apply the fundamentals of spectroscopy, especially photo spectrometry to simple molecules (Course "Chemie voor levenswetenschappen 1")


Content

The aim of this course it to make the student aware of techniques used in biological research, from the molecular to the global scale. The students will be introduced to the principles and research applications of (by increasing degree of organization):

  • DNA sequencing (Sanger and next generation with applications in transcriptomics, genotyping and genomic variation discovery, de novo genome assembly and metagenome analysis)
  • Microscopy (light, darkfield, phase contrast, DIC, UV and fluorescence, confocal microscopy, electronic microscopy, tunneling electron microscopy)
  • Chromatography (gas chromatography, HPLC, column chromatography, gas/liquid chromatography, ion exchange chromatography, GC/MS and LC MS)
  • Spectroscopy (asborbance, fluorescence, infrared, raman, and NMR)
  • Electrophoresis (gradient, pulse field, capillary)
  • Remote sensing, at both the plant and the landscape scale
  • Wildlife monitoring - Climate monitoring and manipulations (eddy covariance towers, free air CO2 enrichment, IR heaters, rain curtains, lysimeters, ecotrons). This will be accompanied by more general lectures putting these techniques in a broader context
    • Experimental design
    • Mainstream biological models
    • Techniques and ethics

At the end of the course, the student should be able to chose the method best adapted to a give biological question. This will also be the topic of the course task done throughout the semester by students in small groups.



Organisational and teaching methods
Organisational methods  
Lecture  
Practical  
Project  
Response lecture  


Evaluation

Period 1    Credits 5,00

Evaluation method
Oral evaluation during teaching period20 %
Transfer of partial marks within the academic year
Presentation
Written exam80 %
Evaluation conditions (participation and/or pass)
Conditions Participation to practical exercises and demonstrations is required to be allowed to pass the written exam. Participation to all evaluations is mandatory.
Consequences If a student does not participate at one of the parts of evaluation as stated before, he/she will obtain a -N- ('examenonderdeel niet volledig afgelegd: ongewettigd afwezig voor onderde(e)len van de evaluatie') as a final grade for this course.
Additional information

Written exam (80% of the final mark) in Dutch or English, upon request.

The project work will be evaluated with a written report and an oral defence and will count for 20% of the final mark.


Second examination period

Evaluation second examination opportunity different from first examination opprt
No
Explanation (English)The partial score of the project presentation is maintained during the second evaluation period.
 

Compulsory course material
 

Power point presentations, course texts

 

Recommended reading
  Introduction to Instrumentation in Life Sciences,Prakash Singh Bisen, Anjana Sharma,9781466512405,Available as e-book: https://www.taylorfrancis.com/books/mono/10.1201/b12910/introduction-ins trumentation-life-sciences-prakash-singh-bisen


Learning outcomes
Bachelor of Biology
  •  EC 
  • EC 3:A graduate of the Bachelor of Biology programmetakes into account thenecessity of the inter- and multidisciplinary approach to examine the living world in all its aspects. He/she has to that end extensive knowledge and insight in other relevantfields of science (chemistry, physics, geology).

  •  EC 
  • EC 5: A graduate of the Bachelor of Biology programme is able to carefully run experiments and to make observationsin whichhe/she strives for the highest possible accuracyand acts with integrityin his or her observations and measurements.

  •  EC 
  • EC 7: A graduate of the Bachelor of Biology programme is, under supervision,able to evaluate research methods and interpretations in a critical manner and is able to determine intrinsic uncertainties and limitations.

  •  EC 
  • EC 8:A graduate of the Bachelor of Biology programme is able to report and present orally and in writing in Dutch and in English. He or she is able to communicate about his or her field of study both with colleagues and non-colleagues.

  •  EC 
  • EC 10: A graduate of the Bachelor of Biology programme is able to function as a member of a team.

  •  EC 
  • EC 11: A graduate of the Bachelor of Biology programmebehaves according to the ethical, moral, philosophical, legal and safety aspects of his or her field of study.

 

  EC = learning outcomes      DC = partial outcomes      BC = evaluation criteria  
Offered inTolerance3
3rd year Bachelor of Biology J



1   Education, Examination and Legal Position Regulations art.12.2, section 2.
2   Education, Examination and Legal Position Regulations art.15.1, section 3.
3   Education, Examination and Legal Position Regulations art.16.9, section 2.